RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54530.1 View Network Show in Genome Browser |
| Other Names | Os02g0786400 |
| Description | SCP-like extracellular protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33405035-33405605 Nucleotide Length: 537 |
| Protein-coding | LOC_Os02g54530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59930 LOC_Os02g50620 LOC_Os02g48840 LOC_Os01g58730 LOC_Os02g52940 LOC_Os01g28450 LOC_Os01g28500 LOC_Os02g02560 LOC_Os02g38200 LOC_Os02g27300 LOC_Os01g44130 More.. |
| Downstream Genes | LOC_Os03g56820 LOC_Os12g43363 LOC_Os09g34860 LOC_Os07g03690 LOC_Os12g43700 LOC_Os11g03050 LOC_Os12g02820 LOC_Os08g39300 LOC_Os07g03710 LOC_Os05g41610 LOC_Os07g03730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54530.1 |
| Rice Genome Annotation | LOC_Os02g54530.1 |
| Ricechip | LOC_Os02g54530.1 |
| KEGG | osa:4330951 dosa:Os02t0786400-00 |
| Entrez-Gene | 4330951 |