RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54624.1 View Network Show in Genome Browser |
| Other Names | Os02g0787500 |
| Description | zinc finger family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33456910-33461552 Nucleotide Length: 1212 |
| Protein-coding | LOC_Os02g54624 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02480 LOC_Os01g62070 LOC_Os01g68710 |
| Downstream Genes | LOC_Os05g24601 LOC_Os12g32250 LOC_Os03g50340 LOC_Os08g42540 LOC_Os03g55130 LOC_Os03g52780 LOC_Os07g39310 LOC_Os10g41550 LOC_Os04g46280 LOC_Os07g09600 LOC_Os08g44010 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5543 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54624.1 |
| Rice Genome Annotation | LOC_Os02g54624.1 |
| Ricechip | LOC_Os02g54624.1 |
| KEGG | osa:4330958 dosa:Os02t0787500-01 |
| Entrez-Gene | 4330958 |