RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54700.2 View Network Show in Genome Browser |
| Other Names | Os02g0788400 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33493421-33495847 Nucleotide Length: 870 |
| Protein-coding | LOC_Os02g54700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03070 LOC_Os01g19840 LOC_Os02g54470 LOC_Os01g59990 LOC_Os02g28810 LOC_Os01g10820 LOC_Os02g06700 LOC_Os02g14059 LOC_Os01g64090 LOC_Os02g34460 LOC_Os02g30050 More.. |
| Downstream Genes | LOC_Os08g21660 LOC_Os05g16660 LOC_Os07g03230 LOC_Os10g41960 LOC_Os06g48350 LOC_Os09g15770 LOC_Os11g41610 LOC_Os03g56241 LOC_Os11g38959 LOC_Os11g37080 LOC_Os07g08660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54700.2 |
| Rice Genome Annotation | LOC_Os02g54700.2 |
| Ricechip | LOC_Os02g54700.2 |
| KEGG | osa:4330963 dosa:Os02t0788400-01 |
| Entrez-Gene | 4330963 |