RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54710.1 View Network Show in Genome Browser |
| Other Names | Os02g0788500 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33495975-33498162 Nucleotide Length: 723 |
| Protein-coding | LOC_Os02g54710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72800 LOC_Os02g41470 |
| Downstream Genes | LOC_Os12g17910 LOC_Os06g09717 LOC_Os06g09679 LOC_Os05g29860 LOC_Os03g24020 LOC_Os05g35730 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54710.1 |
| Rice Genome Annotation | LOC_Os02g54710.1 |
| Ricechip | LOC_Os02g54710.1 |
| KEGG | osa:4330964 dosa:Os02t0788500-01 |
| Entrez-Gene | 4330964 |