RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54980.1 View Network Show in Genome Browser |
| Other Names | Os02g0792800 |
| Description | pheophorbide a oxygenase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33688350-33690488 Nucleotide Length: 1620 |
| Protein-coding | LOC_Os02g54980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32120 LOC_Os01g57560 |
| Downstream Genes | LOC_Os07g37030 LOC_Os07g44330 LOC_Os06g48510 LOC_Os04g32660 LOC_Os07g05400 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54980.1 |
| Rice Genome Annotation | LOC_Os02g54980.1 |
| Ricechip | LOC_Os02g54980.1 |
| KEGG | osa:4330982 dosa:Os02t0792800-01 |
| Entrez-Gene | 4330982 |