RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55030.1 View Network Show in Genome Browser |
| Other Names | Os02g0793300 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33709953-33719486 Nucleotide Length: 2331 |
| Protein-coding | LOC_Os02g55030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50130 LOC_Os02g32060 |
| Downstream Genes | LOC_Os08g28840 LOC_Os06g04910 LOC_Os06g03910 LOC_Os04g58900 LOC_Os03g59580 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR408-5p osa-miR444f osa-miR5484 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55030.1 |
| Rice Genome Annotation | LOC_Os02g55030.1 |
| Ricechip | LOC_Os02g55030.1 |
| KEGG | osa:4330987 dosa:Os02t0793300-01 |
| Entrez-Gene | 4330987 |