RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55120.1 View Network Show in Genome Browser |
| Other Names | Os02g0794400 |
| Description | translation initiation factor IF-3, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33758966-33762633 Nucleotide Length: 918 |
| Protein-coding | LOC_Os02g55120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53280 LOC_Os02g33500 LOC_Os01g54020 LOC_Os01g69950 LOC_Os01g28540 LOC_Os02g36570 LOC_Os01g70400 LOC_Os01g71190 LOC_Os02g42570 LOC_Os02g44630 LOC_Os01g49330 More.. |
| Downstream Genes | LOC_Os06g43900 LOC_Os05g45220 LOC_Os08g19850 LOC_Os10g42860 LOC_Os05g48510 LOC_Os12g34860 LOC_Os10g26130 LOC_Os06g02380 LOC_Os05g37830 LOC_Os03g50810 LOC_Os09g36130 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55120.1 |
| Rice Genome Annotation | LOC_Os02g55120.1 |
| Ricechip | LOC_Os02g55120.1 |
| KEGG | osa:4330995 dosa:Os02t0794400-01 |
| Entrez-Gene | 4330995 |