RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55340.1 View Network Show in Genome Browser |
| Other Names | Os02g0796700 |
| Description | WD domain and HEAT domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33885845-33893775 Nucleotide Length: 4467 |
| Protein-coding | LOC_Os02g55340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g65230 LOC_Os01g62080 LOC_Os01g48920 LOC_Os02g47410 LOC_Os02g47220 LOC_Os01g72790 LOC_Os02g46090 LOC_Os01g43410 LOC_Os01g59360 LOC_Os01g61590 LOC_Os02g05310 More.. |
| Downstream Genes | LOC_Os11g29690 LOC_Os08g21590 LOC_Os05g08810 LOC_Os05g32600 LOC_Os07g48290 LOC_Os03g21620 LOC_Os03g53720 LOC_Os06g02550 LOC_Os03g55620 LOC_Os02g57250 LOC_Os03g44200 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55340.1 |
| Rice Genome Annotation | LOC_Os02g55340.1 |
| Ricechip | LOC_Os02g55340.1 |
| KEGG | osa:4331010 dosa:Os02t0796700-01 |
| Entrez-Gene | 4331010 |