RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55410.1 View Network Show in Genome Browser |
| Other Names | Os02g0797400 |
| Description | MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33936188-33940506 Nucleotide Length: 2190 |
| Protein-coding | LOC_Os02g55410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g36390 LOC_Os01g63710 LOC_Os02g30800 LOC_Os01g14610 LOC_Os02g53680 LOC_Os01g49010 LOC_Os01g08970 LOC_Os01g08960 LOC_Os02g21970 LOC_Os02g11050 LOC_Os02g42230 More.. |
| Downstream Genes | LOC_Os12g37400 LOC_Os11g29380 LOC_Os05g39850 LOC_Os12g03130 LOC_Os11g03430 LOC_Os05g14590 LOC_Os06g08790 LOC_Os03g08640 LOC_Os02g58220 LOC_Os11g29390 LOC_Os04g28090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55410.1 |
| Rice Genome Annotation | LOC_Os02g55410.1 |
| Ricechip | LOC_Os02g55410.1 |
| KEGG | osa:4331016 dosa:Os02t0797400-01 |
| Entrez-Gene | 4331016 |