RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g55420.1 View Network Show in Genome Browser
Other Names	Os02g0797500
Description	aminotransferase, classes I and II, domain containing protein, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 33942024-33946395 Nucleotide Length: 1377
Protein-coding	LOC_Os02g55420

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005576	extracellular region	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g09700 LOC_Os01g65090 LOC_Os01g27520 LOC_Os02g22780 LOC_Os01g60790 LOC_Os02g04700 LOC_Os02g46130
Downstream Genes	LOC_Os06g03990 LOC_Os04g48850 LOC_Os03g51740 LOC_Os07g41750 LOC_Os11g01420 LOC_Os03g17450 LOC_Os07g30200 LOC_Os12g22600 LOC_Os03g63400

Pathways
KEGG Pathways	rn00250 rn00710 rn01100 rn01110 rn01120 rn01210 rn00330 rn00270 rn00950 rn00401 rn00360 rn00400 rn00960 rn00350
Metacyc Pathways	ASPARTATESYN-PWY ASPARAGINE-DEG1-PWY MALATE-ASPARTATE-SHUTTLE-PWY ASPARAGINE-BIOSYNTHESIS GLUTAMINEFUM-PWY PWY-6642 ASPARTATE-DEG1-PWY PWY-6643 GLUTDEG-PWY CYSTEINE-DEG-PWY PWY-6318 PWY-6638 PWY-5913

Database Links
Gramene	LOC_Os02g55420.1
Rice Genome Annotation	LOC_Os02g55420.1
Ricechip	LOC_Os02g55420.1
KEGG	osa:4331017 dosa:Os02t0797500-01
Entrez-Gene	4331017