RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55560.1 View Network Show in Genome Browser |
| Other Names | Os02g0799000 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34026273-34030302 Nucleotide Length: 1065 |
| Protein-coding | LOC_Os02g55560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g26280 LOC_Os02g54590 LOC_Os01g63280 LOC_Os02g41500 LOC_Os01g51200 LOC_Os01g56330 LOC_Os02g34750 LOC_Os02g17910 LOC_Os01g38950 LOC_Os02g03060 LOC_Os01g13060 More.. |
| Downstream Genes | LOC_Os12g38860 LOC_Os03g49750 LOC_Os09g29510 LOC_Os03g05470 LOC_Os04g06210 LOC_Os05g06990 LOC_Os10g18990 LOC_Os02g56560 LOC_Os05g20150 LOC_Os04g42700 LOC_Os06g49170 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55560.1 |
| Rice Genome Annotation | LOC_Os02g55560.1 |
| Ricechip | LOC_Os02g55560.1 |
| KEGG | osa:4331028 dosa:Os02t0799000-01 |
| Entrez-Gene | 4331028 |