RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55630.1 View Network Show in Genome Browser |
| Other Names | Os02g0800000 |
| Description | COBW domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34071028-34075507 Nucleotide Length: 1344 |
| Protein-coding | LOC_Os02g55630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53450 LOC_Os01g65460 LOC_Os01g70400 LOC_Os02g53400 LOC_Os02g34810 LOC_Os01g31680 LOC_Os01g66000 LOC_Os01g68450 |
| Downstream Genes | LOC_Os05g49050 LOC_Os08g32930 LOC_Os04g55180 LOC_Os08g13890 LOC_Os04g40900 LOC_Os03g36750 LOC_Os04g53490 LOC_Os04g31040 LOC_Os07g43390 LOC_Os07g38530 LOC_Os07g05470 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55630.1 |
| Rice Genome Annotation | LOC_Os02g55630.1 |
| Ricechip | LOC_Os02g55630.1 |
| KEGG | osa:4331034 dosa:Os02t0800000-01 |
| Entrez-Gene | 4331034 |