RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55640.1 View Network Show in Genome Browser |
| Other Names | Os02g0800100 |
| Description | proteasome maturation factor UMP1 family protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34075807-34078160 Nucleotide Length: 426 |
| Protein-coding | LOC_Os02g55640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g36930 LOC_Os01g69130 LOC_Os02g08370 LOC_Os02g38580 LOC_Os02g38574 LOC_Os02g38490 LOC_Os01g28680 LOC_Os02g11050 LOC_Os02g08140 |
| Downstream Genes | LOC_Os02g55770 LOC_Os02g55720 LOC_Os02g55710 LOC_Os02g55670 LOC_Os05g13440 LOC_Os10g31790 LOC_Os03g57100 LOC_Os11g39650 LOC_Os07g16140 LOC_Os06g50170 LOC_Os06g07630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55640.1 |
| Rice Genome Annotation | LOC_Os02g55640.1 |
| Ricechip | LOC_Os02g55640.1 |
| KEGG | osa:4331035 dosa:Os02t0800100-01 |
| Entrez-Gene | 4331035 |