RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g55940.1 View Network Show in Genome Browser |
| Other Names | Os02g0803200 |
| Description | ribosomal protein S15 containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34238929-34242102 Nucleotide Length: 1344 |
| Protein-coding | LOC_Os02g55940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40460 LOC_Os01g40150 LOC_Os02g49980 LOC_Os01g40170 LOC_Os02g13130 LOC_Os01g53700 LOC_Os01g51390 LOC_Os01g73550 LOC_Os02g24020 LOC_Os01g39260 LOC_Os02g22780 More.. |
| Downstream Genes | LOC_Os07g44190 LOC_Os07g07310 LOC_Os05g49970 LOC_Os09g34010 LOC_Os05g01750 LOC_Os06g04610 LOC_Os03g25450 LOC_Os04g48700 LOC_Os12g21500 LOC_Os03g63720 LOC_Os11g38600 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g55940.1 |
| Rice Genome Annotation | LOC_Os02g55940.1 |
| Ricechip | LOC_Os02g55940.1 |
| KEGG | osa:4331046 dosa:Os02t0803200-01 |
| Entrez-Gene | 4331046 |