RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56100.1 View Network Show in Genome Browser |
| Other Names | Os02g0804900 |
| Description | ribonucleoside-diphosphate reductase large subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34328237-34333226 Nucleotide Length: 2433 |
| Protein-coding | LOC_Os02g56100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67250 LOC_Os02g44510 LOC_Os02g42230 LOC_Os01g64820 LOC_Os02g04050 LOC_Os02g53790 LOC_Os02g32490 LOC_Os02g03060 LOC_Os01g18860 LOC_Os02g53680 LOC_Os02g27760 More.. |
| Downstream Genes | LOC_Os06g14620 LOC_Os06g03720 LOC_Os05g46270 LOC_Os10g34750 LOC_Os11g03430 LOC_Os12g03130 LOC_Os03g15810 LOC_Os09g24220 LOC_Os02g56130 LOC_Os03g30934 LOC_Os06g07210 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY0-166 |
| Reference | |
|---|---|
| PubMed | 19297585 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56100.1 |
| Rice Genome Annotation | LOC_Os02g56100.1 |
| Ricechip | LOC_Os02g56100.1 |
| KEGG | osa:4331059 dosa:Os02t0804900-00 |
| Entrez-Gene | 4331059 |