RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56110.1 View Network Show in Genome Browser |
| Other Names | Os02g0805000 |
| Description | AP-1 complex subunit gamma-1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34336372-34344029 Nucleotide Length: 2670 |
| Protein-coding | LOC_Os02g56110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50770 LOC_Os01g12880 LOC_Os01g53670 LOC_Os01g74180 LOC_Os01g59790 LOC_Os01g16030 LOC_Os02g17350 LOC_Os01g61030 LOC_Os02g04440 |
| Downstream Genes | LOC_Os03g23950 LOC_Os05g46550 LOC_Os03g59660 LOC_Os03g57040 LOC_Os04g51120 LOC_Os05g27320 LOC_Os10g37520 LOC_Os07g10150 LOC_Os07g49040 LOC_Os12g01390 LOC_Os11g01380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56110.1 |
| Rice Genome Annotation | LOC_Os02g56110.1 |
| Ricechip | LOC_Os02g56110.1 |
| KEGG | osa:4331060 dosa:Os02t0805000-01 |
| Entrez-Gene | 4331060 |