RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56130.1 View Network Show in Genome Browser |
| Other Names | Os02g0805200 |
| Description | PCNA - Putative DNA replicative polymerase clamp, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34351407-34353656 Nucleotide Length: 792 |
| Protein-coding | LOC_Os02g56130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67250 LOC_Os02g53680 LOC_Os02g53500 LOC_Os02g42320 LOC_Os02g45940 LOC_Os01g61920 LOC_Os02g30800 LOC_Os02g03060 LOC_Os02g34840 LOC_Os01g36570 LOC_Os01g58680 More.. |
| Downstream Genes | LOC_Os05g46270 LOC_Os09g24220 LOC_Os11g36390 LOC_Os05g06840 LOC_Os12g04440 LOC_Os11g04670 LOC_Os12g07720 LOC_Os05g19270 LOC_Os11g08330 LOC_Os03g03650 LOC_Os11g03430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56130.1 |
| Rice Genome Annotation | LOC_Os02g56130.1 |
| Ricechip | LOC_Os02g56130.1 |
| KEGG | osa:4331062 dosa:Os02t0805200-01 |
| Entrez-Gene | 4331062 |