RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56210.1 View Network Show in Genome Browser |
| Other Names | Os02g0805900 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34378631-34382107 Nucleotide Length: 972 |
| Protein-coding | LOC_Os02g56210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42860 LOC_Os02g49090 LOC_Os02g50130 LOC_Os02g32060 LOC_Os02g42040 LOC_Os02g45070 LOC_Os01g64690 LOC_Os01g15310 LOC_Os01g10050 LOC_Os01g58220 LOC_Os01g67134 More.. |
| Downstream Genes | LOC_Os04g36810 LOC_Os06g19660 LOC_Os07g31340 LOC_Os07g36190 LOC_Os06g14420 LOC_Os04g45040 LOC_Os12g06020 LOC_Os11g05650 LOC_Os02g58490 LOC_Os08g28840 LOC_Os03g59580 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56210.1 |
| Rice Genome Annotation | LOC_Os02g56210.1 |
| Ricechip | LOC_Os02g56210.1 |
| KEGG | osa:4331069 dosa:Os02t0805900-01 |
| Entrez-Gene | 4331069 |