RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56320.1 View Network Show in Genome Browser |
| Other Names | Os02g0807100 |
| Description | glycogen synthase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34475930-34483804 Nucleotide Length: 2163 |
| Protein-coding | LOC_Os02g56320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g44220 LOC_Os02g32660 LOC_Os01g63270 |
| Downstream Genes | LOC_Os08g25734 LOC_Os09g12660 LOC_Os07g13980 LOC_Os03g52460 LOC_Os05g50380 LOC_Os06g51084 LOC_Os06g26234 LOC_Os04g33460 LOC_Os03g55090 LOC_Os10g30156 LOC_Os06g06560 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172a osa-miR172d-3p osa-miR172b |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56320.1 |
| Rice Genome Annotation | LOC_Os02g56320.1 |
| Ricechip | LOC_Os02g56320.1 |
| KEGG | osa:4331077 dosa:Os02t0807100-01 |
| Entrez-Gene | 4331077 |