RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56740.1 View Network Show in Genome Browser |
| Other Names | Os02g0812400 |
| Description | translation initiation factor eIF-2B subunit epsilon, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34784156-34793387 Nucleotide Length: 2199 |
| Protein-coding | LOC_Os02g56740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54700 LOC_Os02g13530 LOC_Os01g25610 LOC_Os02g01560 LOC_Os01g03070 LOC_Os01g52490 LOC_Os02g06700 LOC_Os02g28810 LOC_Os02g05330 LOC_Os01g52260 LOC_Os01g22490 More.. |
| Downstream Genes | LOC_Os12g31380 LOC_Os03g44310 LOC_Os10g25320 LOC_Os03g18510 LOC_Os12g41400 LOC_Os12g07740 LOC_Os03g21550 LOC_Os07g48300 LOC_Os12g42260 LOC_Os07g49220 LOC_Os06g48350 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn00920 rn01100 rn01120 |
| Metacyc Pathways | CYSTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56740.1 |
| Rice Genome Annotation | LOC_Os02g56740.1 |
| Ricechip | LOC_Os02g56740.1 |
| KEGG | osa:4331104 dosa:Os02t0812400-01 |
| Entrez-Gene | 4331104 |