RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56880.1 View Network Show in Genome Browser |
| Other Names | Os02g0813800 |
| Description | transcriptional corepressor LEUNIG, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34862547-34872882 Nucleotide Length: 2409 |
| Protein-coding | LOC_Os02g56880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13730 LOC_Os02g42590 |
| Downstream Genes | LOC_Os04g59460 LOC_Os03g13220 LOC_Os12g41930 LOC_Os08g31560 LOC_Os03g52794 LOC_Os07g12320 LOC_Os05g33710 LOC_Os03g03150 LOC_Os05g49590 LOC_Os07g40930 LOC_Os03g17780 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56880.1 |
| Rice Genome Annotation | LOC_Os02g56880.1 |
| Ricechip | LOC_Os02g56880.1 |
| KEGG | osa:4331114 dosa:Os02t0813800-01 |
| Entrez-Gene | 4331114 |