RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g56970.1 View Network Show in Genome Browser |
| Other Names | Os02g0814800 |
| Description | uncharacterized protein yqjG, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 34913714-34915486 Nucleotide Length: 1215 |
| Protein-coding | LOC_Os02g56970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72130 LOC_Os01g49710 LOC_Os01g27260 LOC_Os02g12800 LOC_Os01g27360 |
| Downstream Genes | LOC_Os10g38710 LOC_Os10g38580 LOC_Os10g38360 LOC_Os10g38340 LOC_Os09g29200 LOC_Os09g20220 LOC_Os04g35560 LOC_Os03g04260 LOC_Os10g38160 LOC_Os10g38470 LOC_Os10g38700 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6249a osa-miR6249b |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 |
| Metacyc Pathways | PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g56970.1 |
| Rice Genome Annotation | LOC_Os02g56970.1 |
| Ricechip | LOC_Os02g56970.1 |
| KEGG | osa:4331123 dosa:Os02t0814800-01 |
| Entrez-Gene | 4331123 |