RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g57040.1 View Network Show in Genome Browser
Other Names	Os02g0815500
Description	dehydrogenase, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 34930270-34934184 Nucleotide Length: 1146
Protein-coding	LOC_Os02g57040

Gene Ontology Classification
GO	Name	Type	Code
GO:0008219	cell death	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005777	peroxisome	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g71300 LOC_Os01g66720 LOC_Os01g54940 LOC_Os01g42850 LOC_Os02g50230 LOC_Os02g49270 LOC_Os01g68030 LOC_Os02g32460 LOC_Os01g16146 LOC_Os02g48350 LOC_Os02g49590 More..
Downstream Genes	LOC_Os02g58650 LOC_Os05g23600 LOC_Os03g59610 LOC_Os04g41960 LOC_Os12g01160 LOC_Os11g01154 LOC_Os06g30320 LOC_Os12g12580 LOC_Os12g12590 LOC_Os12g12470 LOC_Os12g12560 More..

Pathways
KEGG Pathways	rn00010 rn01100 rn01110 rn01120 rn00620 rn00680
Metacyc Pathways	PWY-5076 PWY-5079 P127-PWY FERMENTATION-PWY PWY-3801 PWY66-21 PWY-5057 PWY-5078 PWY-5082 P124-PWY ANAEROFRUCAT-PWY PWY-1801

Database Links
Gramene	LOC_Os02g57040.1
Rice Genome Annotation	LOC_Os02g57040.1
Ricechip	LOC_Os02g57040.1
KEGG	osa:4331130 dosa:Os02t0815500-01
Entrez-Gene	4331130