RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g57510.4 View Network Show in Genome Browser |
| Other Names | Os02g0820700 |
| Description | SNARE domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 35234147-35238028 Nucleotide Length: 357 |
| Protein-coding | LOC_Os02g57510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02720 LOC_Os01g73230 LOC_Os02g32740 LOC_Os02g24080 LOC_Os02g47440 LOC_Os02g11890 |
| Downstream Genes | LOC_Os03g25390 LOC_Os08g17600 LOC_Os11g06740 LOC_Os06g02570 LOC_Os07g07000 LOC_Os06g07200 LOC_Os03g11380 LOC_Os06g39050 LOC_Os03g57310 LOC_Os10g11260 LOC_Os03g52650 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g57510.4 |
| Rice Genome Annotation | LOC_Os02g57510.4 |
| Ricechip | LOC_Os02g57510.4 |
| KEGG | osa:4331172 dosa:Os02t0820700-01 |
| Entrez-Gene | 4331172 |