RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g57590.1 View Network Show in Genome Browser |
| Other Names | Os02g0821800 |
| Description | rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 35271587-35273660 Nucleotide Length: 921 |
| Protein-coding | LOC_Os02g57590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49610 LOC_Os01g33030 LOC_Os02g01560 LOC_Os01g67134 LOC_Os02g56960 LOC_Os02g54470 LOC_Os01g25610 LOC_Os02g14059 LOC_Os02g49270 LOC_Os02g27760 LOC_Os02g32030 More.. |
| Downstream Genes | LOC_Os03g22880 LOC_Os03g22740 LOC_Os03g22730 LOC_Os03g22350 LOC_Os06g16290 LOC_Os08g31810 LOC_Os03g25450 LOC_Os07g08330 LOC_Os07g10350 LOC_Os04g51630 LOC_Os08g03640 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00380 rn00624 rn01120 rn00340 rn00350 rn00130 rn01100 rn01110 |
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g57590.1 |
| Rice Genome Annotation | LOC_Os02g57590.1 |
| Ricechip | LOC_Os02g57590.1 |
| KEGG | osa:4331181 dosa:Os02t0821800-02 |
| Entrez-Gene | 4331181 |