RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g57630.4 View Network Show in Genome Browser |
| Other Names | Os02g0822200 |
| Description | ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 35293567-35296557 Nucleotide Length: 837 |
| Protein-coding | LOC_Os02g57630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01390 LOC_Os02g05310 LOC_Os02g08370 LOC_Os02g01110 LOC_Os02g51840 LOC_Os02g05340 LOC_Os02g42550 LOC_Os01g62650 LOC_Os01g52730 LOC_Os01g52720 LOC_Os01g53600 More.. |
| Downstream Genes | LOC_Os03g01970 LOC_Os05g51640 LOC_Os03g11720 LOC_Os07g25420 LOC_Os05g51140 LOC_Os12g19350 LOC_Os04g56980 LOC_Os03g24890 LOC_Os03g08280 LOC_Os06g48640 LOC_Os12g41760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g57630.4 |
| Rice Genome Annotation | LOC_Os02g57630.4 |
| Ricechip | LOC_Os02g57630.4 |
| KEGG | osa:4331185 dosa:Os02t0822200-01 |
| Entrez-Gene | 4331185 |