RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g57820.1 View Network Show in Genome Browser |
| Other Names | Os02g0824300 |
| Description | AT hook motif domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 35415171-35419484 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os02g57820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g48600 LOC_Os01g63910 LOC_Os01g52050 LOC_Os02g57630 LOC_Os01g02960 LOC_Os02g22370 LOC_Os01g62650 |
| Downstream Genes | LOC_Os06g21580 LOC_Os07g27140 LOC_Os08g37270 LOC_Os05g51850 LOC_Os09g23730 LOC_Os05g07680 LOC_Os07g40750 LOC_Os04g14410 LOC_Os11g10400 LOC_Os04g47870 LOC_Os04g39450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g57820.1 |
| Rice Genome Annotation | LOC_Os02g57820.1 |
| Ricechip | LOC_Os02g57820.1 |
| KEGG | osa:4331204 dosa:Os02t0824300-01 |
| Entrez-Gene | 4331204 |