RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g58220.1 View Network Show in Genome Browser |
| Other Names | Os02g0829100 |
| Description | RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 35639745-35642575 Nucleotide Length: 840 |
| Protein-coding | LOC_Os02g58220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53680 LOC_Os02g55410 LOC_Os02g56130 LOC_Os02g53500 LOC_Os02g08300 LOC_Os01g36390 LOC_Os02g30800 LOC_Os01g63710 LOC_Os01g04870 LOC_Os01g49680 LOC_Os02g03340 More.. |
| Downstream Genes | LOC_Os11g29380 LOC_Os05g39850 LOC_Os05g14590 LOC_Os05g46270 LOC_Os03g08640 LOC_Os04g57730 LOC_Os12g37400 LOC_Os06g50910 LOC_Os08g25060 LOC_Os11g36390 LOC_Os05g29010 More.. |
| Reference | |
|---|---|
| PubMed | 14520573 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g58220.1 |
| Rice Genome Annotation | LOC_Os02g58220.1 |
| Ricechip | LOC_Os02g58220.1 |
| KEGG | osa:4331236 dosa:Os02t0829100-01 |
| Entrez-Gene | 4331236 |