RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g58720.2 View Network Show in Genome Browser |
| Other Names | Os02g0833900 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 35875509-35876997 Nucleotide Length: 981 |
| Protein-coding | LOC_Os02g58720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71474 LOC_Os01g33160 LOC_Os01g39830 LOC_Os02g44320 LOC_Os02g20540 LOC_Os01g11710 LOC_Os01g25560 LOC_Os01g04710 LOC_Os01g62490 LOC_Os02g12730 LOC_Os01g06580 More.. |
| Downstream Genes | LOC_Os03g08790 LOC_Os06g09630 LOC_Os10g06000 LOC_Os10g05990 LOC_Os10g05980 LOC_Os04g31410 LOC_Os04g42620 LOC_Os11g02350 LOC_Os12g08170 LOC_Os05g28520 LOC_Os03g03164 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00680 rn01100 rn01120 rn00360 rn00940 rn01110 |
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g58720.2 |
| Rice Genome Annotation | LOC_Os02g58720.2 |
| Ricechip | LOC_Os02g58720.2 |
| KEGG | osa:4331271 dosa:Os02t0833900-02 |
| Entrez-Gene | 4331271 |