RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g58730.2 View Network Show in Genome Browser |
| Other Names | Os02g0834000 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 35880877-35885674 Nucleotide Length: 588 |
| Protein-coding | LOC_Os02g58730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g20850 LOC_Os01g73310 LOC_Os02g02840 LOC_Os02g50860 LOC_Os02g48730 LOC_Os01g12900 LOC_Os02g55970 LOC_Os01g68540 LOC_Os02g56580 LOC_Os02g47420 LOC_Os02g10880 More.. |
| Downstream Genes | LOC_Os06g21340 LOC_Os05g01600 LOC_Os06g12790 LOC_Os08g43130 LOC_Os05g28290 LOC_Os05g43820 LOC_Os11g06390 LOC_Os05g29870 LOC_Os09g27650 LOC_Os03g61970 LOC_Os10g36650 More.. |
| Reference | |
|---|---|
| PubMed | 15202503 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g58730.2 |
| Rice Genome Annotation | LOC_Os02g58730.2 |
| Ricechip | LOC_Os02g58730.2 |
| KEGG | osa:4331272 dosa:Os02t0834000-01 |
| Entrez-Gene | 4331272 |