RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g01090.1 View Network Show in Genome Browser |
| Other Names | Os03g0100300 |
| Description | peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 63385-66162 Nucleotide Length: 996 |
| Protein-coding | LOC_Os03g01090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10970 LOC_Os02g02890 LOC_Os01g40050 LOC_Os01g02080 LOC_Os01g47760 |
| Downstream Genes | LOC_Os05g48930 LOC_Os11g38990 LOC_Os09g39780 LOC_Os09g36670 LOC_Os08g29370 LOC_Os07g37830 LOC_Os07g29390 LOC_Os07g08190 LOC_Os06g04000 LOC_Os05g01270 LOC_Os03g59700 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR162a |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g01090.1 |
| Rice Genome Annotation | LOC_Os03g01090.1 |
| Ricechip | LOC_Os03g01090.1 |
| KEGG | osa:4331278 dosa:Os03t0100300-01 |
| Entrez-Gene | 4331278 |