RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g01170.1 View Network Show in Genome Browser |
| Other Names | Os03g0101300 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 115789-119092 Nucleotide Length: 1560 |
| Protein-coding | LOC_Os03g01170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g38670 LOC_Os01g38680 LOC_Os02g14110 LOC_Os02g34510 LOC_Os01g42430 LOC_Os02g07830 LOC_Os02g06540 LOC_Os01g73130 LOC_Os01g08200 LOC_Os01g09460 LOC_Os02g01250 More.. |
| Downstream Genes | LOC_Os03g01180 LOC_Os03g39710 LOC_Os04g42490 LOC_Os06g06090 LOC_Os03g17700 LOC_Os11g42160 LOC_Os06g35540 LOC_Os11g06890 LOC_Os05g01560 LOC_Os08g08070 LOC_Os07g37320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g01170.1 |
| Rice Genome Annotation | LOC_Os03g01170.1 |
| Ricechip | LOC_Os03g01170.1 |
| KEGG | osa:4331286 dosa:Os03t0101300-01 |
| Entrez-Gene | 4331286 |