RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g01180.1 View Network Show in Genome Browser |
| Other Names | Os03g0101500 |
| Description | phosphoglycerate mutase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 120877-122838 Nucleotide Length: 780 |
| Protein-coding | LOC_Os03g01180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08180 LOC_Os01g40860 LOC_Os01g58730 LOC_Os01g38510 LOC_Os03g01170 LOC_Os02g02410 LOC_Os02g48110 LOC_Os01g68324 LOC_Os01g71400 LOC_Os02g02524 LOC_Os02g36940 More.. |
| Downstream Genes | LOC_Os07g08430 LOC_Os11g37920 LOC_Os04g58090 LOC_Os08g17680 LOC_Os09g27830 LOC_Os05g06440 LOC_Os09g19734 LOC_Os03g53800 LOC_Os03g03450 LOC_Os06g39260 LOC_Os07g14270 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1847.1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g01180.1 |
| Rice Genome Annotation | LOC_Os03g01180.1 |
| Ricechip | LOC_Os03g01180.1 |
| KEGG | osa:4331288 dosa:Os03t0101500-01 |
| Entrez-Gene | 4331288 |