RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g01770.1 View Network Show in Genome Browser |
| Other Names | Os03g0108000 |
| Description | rhodanese, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 482919-484763 Nucleotide Length: 393 |
| Protein-coding | LOC_Os03g01770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38240 LOC_Os02g01220 LOC_Os02g56050 LOC_Os02g32460 LOC_Os02g40500 LOC_Os02g43180 |
| Downstream Genes | LOC_Os09g36040 LOC_Os09g10750 LOC_Os05g25780 LOC_Os04g17660 LOC_Os03g18020 LOC_Os07g48810 LOC_Os12g41500 LOC_Os06g50930 LOC_Os04g42930 LOC_Os06g12030 LOC_Os08g45140 More.. |
| Reference | |
|---|---|
| PubMed | 17388894 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g01770.1 |
| Rice Genome Annotation | LOC_Os03g01770.1 |
| Ricechip | LOC_Os03g01770.1 |
| KEGG | osa:4331335 dosa:Os03t0108000-01 |
| Entrez-Gene | 4331335 |