RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g01800.1 View Network Show in Genome Browser |
| Other Names | Os03g0108300 |
| Description | glycosyl hydrolases family 16, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 492652-494093 Nucleotide Length: 933 |
| Protein-coding | LOC_Os03g01800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g33550 LOC_Os01g71474 LOC_Os02g17900 LOC_Os01g39830 LOC_Os01g51840 LOC_Os02g40260 LOC_Os02g17880 |
| Downstream Genes | LOC_Os11g26340 LOC_Os05g02820 LOC_Os06g22919 LOC_Os10g06000 LOC_Os10g05990 LOC_Os10g05980 LOC_Os10g05970 LOC_Os03g28330 LOC_Os05g10210 LOC_Os11g26190 LOC_Os06g36050 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g01800.1 |
| Rice Genome Annotation | LOC_Os03g01800.1 |
| Ricechip | LOC_Os03g01800.1 |
| KEGG | osa:4331336 dosa:Os03t0108300-02 |
| Entrez-Gene | 4331336 |