RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g01910.1 View Network Show in Genome Browser |
| Other Names | Os03g0109600 |
| Description | transcription factor BTF3, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 560210-562685 Nucleotide Length: 531 |
| Protein-coding | LOC_Os03g01910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59990 LOC_Os02g27760 LOC_Os01g71230 LOC_Os01g50360 LOC_Os01g61814 LOC_Os01g16890 LOC_Os02g48660 LOC_Os01g54870 LOC_Os02g01332 LOC_Os01g25610 LOC_Os02g01560 More.. |
| Downstream Genes | LOC_Os03g02960 LOC_Os05g40820 LOC_Os07g10720 LOC_Os07g12250 LOC_Os03g18570 LOC_Os03g18580 LOC_Os05g27940 LOC_Os09g32976 LOC_Os08g23710 LOC_Os09g24690 LOC_Os08g06040 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Reference | |
|---|---|
| PubMed | 14750518 23147221 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g01910.1 |
| Rice Genome Annotation | LOC_Os03g01910.1 |
| Ricechip | LOC_Os03g01910.1 |
| KEGG | osa:4331347 dosa:Os03t0109600-01 |
| Entrez-Gene | 4331347 |