RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g02450.1 View Network Show in Genome Browser |
| Other Names | Os03g0115500 |
| Description | pyridoxamine 5'-phosphate oxidase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 878838-880702 Nucleotide Length: 618 |
| Protein-coding | LOC_Os03g02450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12910 |
| Downstream Genes | LOC_Os10g23120 LOC_Os08g40570 LOC_Os07g38620 |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00750 |
| Metacyc Pathways | PLPSAL-PWY PYRIDOXSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g02450.1 |
| Rice Genome Annotation | LOC_Os03g02450.1 |
| Ricechip | LOC_Os03g02450.1 |
| KEGG | osa:9271623 dosa:Os03t0115500-01 |
| Entrez-Gene | 9271623 |