RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g02460.1 View Network Show in Genome Browser |
| Other Names | Os03g0115700 |
| Description | retinol dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 884559-887005 Nucleotide Length: 999 |
| Protein-coding | LOC_Os03g02460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38440 LOC_Os01g53680 LOC_Os02g30060 LOC_Os01g09570 LOC_Os02g30714 LOC_Os02g30690 LOC_Os01g11070 LOC_Os01g04260 LOC_Os01g62244 |
| Downstream Genes | LOC_Os04g52400 LOC_Os04g30760 LOC_Os04g40730 LOC_Os12g41590 LOC_Os11g32030 LOC_Os08g37130 LOC_Os12g43740 LOC_Os04g38420 LOC_Os12g27830 LOC_Os09g04730 LOC_Os11g24484 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g02460.1 |
| Rice Genome Annotation | LOC_Os03g02460.1 |
| Ricechip | LOC_Os03g02460.1 |
| KEGG | osa:4331397 dosa:Os03t0115700-01 |
| Entrez-Gene | 4331397 |