RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g02480.1 View Network Show in Genome Browser |
| Other Names | Os03g0116000 |
| Description | inner membrane protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 906156-909933 Nucleotide Length: 1311 |
| Protein-coding | LOC_Os03g02480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39010 LOC_Os02g15970 LOC_Os01g59060 LOC_Os01g72980 LOC_Os03g02390 LOC_Os01g12730 LOC_Os01g58010 LOC_Os01g62500 LOC_Os01g49190 LOC_Os01g13310 LOC_Os01g70960 More.. |
| Downstream Genes | LOC_Os08g31460 LOC_Os11g47930 LOC_Os05g05950 LOC_Os05g38400 LOC_Os10g37530 LOC_Os08g16480 LOC_Os10g17280 LOC_Os06g02980 LOC_Os05g47980 LOC_Os05g35730 LOC_Os05g23620 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g02480.1 |
| Rice Genome Annotation | LOC_Os03g02480.1 |
| Ricechip | LOC_Os03g02480.1 |
| KEGG | osa:4331399 dosa:Os03t0116000-00 |
| Entrez-Gene | 4331399 |