RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g02570.1 View Network Show in Genome Browser |
| Other Names | Os03g0117000 |
| Description | dihydrodipicolinate reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 950273-952602 Nucleotide Length: 897 |
| Protein-coding | LOC_Os03g02570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49430 LOC_Os01g33360 LOC_Os03g02260 LOC_Os02g02410 LOC_Os01g62290 LOC_Os02g43930 LOC_Os02g53420 LOC_Os01g08560 LOC_Os02g48110 LOC_Os01g32870 LOC_Os02g10220 More.. |
| Downstream Genes | LOC_Os09g31486 LOC_Os03g16880 LOC_Os11g47760 LOC_Os06g10990 LOC_Os03g16860 LOC_Os08g09770 LOC_Os12g05760 LOC_Os11g08440 LOC_Os05g38530 LOC_Os06g02620 LOC_Os11g08460 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00300 rn01100 rn01110 rn01120 |
| Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g02570.1 |
| Rice Genome Annotation | LOC_Os03g02570.1 |
| Ricechip | LOC_Os03g02570.1 |
| KEGG | osa:9272056 dosa:Os03t0117000-00 |
| Entrez-Gene | 9272056 |