RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g02640.1 View Network Show in Genome Browser |
| Other Names | Os03g0117800 |
| Description | methylthioribose kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 974604-978415 Nucleotide Length: 1029 |
| Protein-coding | LOC_Os03g02640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72950 LOC_Os01g48300 LOC_Os01g21990 LOC_Os02g46750 LOC_Os01g64270 LOC_Os01g66000 LOC_Os01g32730 LOC_Os01g51920 LOC_Os01g68450 LOC_Os02g48560 LOC_Os01g08760 More.. |
| Downstream Genes | LOC_Os03g31490 LOC_Os08g19140 LOC_Os12g02120 LOC_Os11g02180 LOC_Os04g58620 LOC_Os04g33940 LOC_Os06g24540 LOC_Os04g55180 LOC_Os03g04440 LOC_Os03g45194 LOC_Os03g12030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g02640.1 |
| Rice Genome Annotation | LOC_Os03g02640.1 |
| Ricechip | LOC_Os03g02640.1 |
| KEGG | osa:4331411 dosa:Os03t0117800-01 |
| Entrez-Gene | 4331411 |