RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g02970.1 View Network Show in Genome Browser |
| Other Names | Os03g0121901,Os03g0121800 |
| Description | Dicer, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1195075-1204839 Nucleotide Length: 5652 |
| Protein-coding | LOC_Os03g02970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16709 LOC_Os02g58490 LOC_Os02g04050 LOC_Os01g67740 LOC_Os01g59510 LOC_Os02g04040 LOC_Os02g04080 LOC_Os02g45070 LOC_Os01g56520 LOC_Os02g04060 LOC_Os02g42600 More.. |
| Downstream Genes | LOC_Os08g10649 LOC_Os09g28000 LOC_Os03g55640 LOC_Os05g49220 LOC_Os04g47870 LOC_Os06g39640 LOC_Os11g40500 LOC_Os12g44390 LOC_Os03g63740 LOC_Os06g51310 LOC_Os05g24160 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR162a osa-miR162b |
| Reference | |
|---|---|
| PubMed | 18826656 16126864 21973320 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g02970.1 |
| Rice Genome Annotation | LOC_Os03g02970.1 |
| Ricechip | LOC_Os03g02970.1 |
| KEGG | osa:4331440 dosa:Os03t0121901-00dosa:Os03t0121800-00 |
| Entrez-Gene | 4345904 |