RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g03450.2 View Network Show in Genome Browser |
| Other Names | Os03g0126000 |
| Description | anthranilate phosphoribosyltransferase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1486493-1490669 Nucleotide Length: 1158 |
| Protein-coding | LOC_Os03g03450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16630 LOC_Os02g48110 LOC_Os02g08180 LOC_Os01g58730 LOC_Os03g01180 LOC_Os01g38510 LOC_Os02g02410 LOC_Os01g23740 LOC_Os02g32490 LOC_Os01g28450 LOC_Os01g74650 More.. |
| Downstream Genes | LOC_Os03g50880 LOC_Os03g61120 LOC_Os03g15780 LOC_Os04g38950 LOC_Os04g39270 LOC_Os08g23150 LOC_Os09g08130 LOC_Os07g08430 LOC_Os03g58260 LOC_Os09g19734 LOC_Os08g17680 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-3p osa-miR2104 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g03450.2 |
| Rice Genome Annotation | LOC_Os03g03450.2 |
| Ricechip | LOC_Os03g03450.2 |
| KEGG | osa:4331468 dosa:Os03t0126000-01 |
| Entrez-Gene | 4331468 |