RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g03610.1 View Network Show in Genome Browser
Other Names	Os03g0128200,Os03g0128100
Description	1,3-beta-glucan synthase component domain containing protein, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 1582176-1602063 Nucleotide Length: 5724
Protein-coding	LOC_Os03g03610

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g55040 LOC_Os02g10880 LOC_Os01g08440 LOC_Os02g52340 LOC_Os01g54870 LOC_Os01g47660 LOC_Os01g51380 LOC_Os02g17940 LOC_Os02g07890 LOC_Os01g59150 LOC_Os01g18050 More..
Downstream Genes	LOC_Os06g08380 LOC_Os07g12890 LOC_Os11g25990 LOC_Os06g39330 LOC_Os06g39270 LOC_Os05g08750 LOC_Os07g08330 LOC_Os11g04070 LOC_Os12g03880 LOC_Os08g03640 LOC_Os08g33488 More..

miRNA Regulations
miRNAs	osa-miR5161 osa-miR166b-5p osa-miR5485

Pathways
Metacyc Pathways	PWY-3781

Database Links
Gramene	LOC_Os03g03610.1
Rice Genome Annotation	LOC_Os03g03610.1
Ricechip	LOC_Os03g03610.1
KEGG	osa:9269677 osa:4331485 dosa:Os03t0128200-01 dosa:Os03t0128100-01
Entrez-Gene	9269677 4346021