RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g03710.1 View Network Show in Genome Browser |
| Other Names | Os03g0129200 |
| Description | ribonuclease protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1653196-1661442 Nucleotide Length: 2760 |
| Protein-coding | LOC_Os03g03710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g34570 LOC_Os01g66730 LOC_Os01g47256 LOC_Os02g57070 LOC_Os01g14950 LOC_Os02g19860 LOC_Os02g04710 LOC_Os02g06500 LOC_Os01g66580 LOC_Os01g24060 LOC_Os01g29409 More.. |
| Downstream Genes | LOC_Os04g43922 LOC_Os03g06190 LOC_Os03g63720 LOC_Os11g07500 LOC_Os09g07820 LOC_Os10g30100 LOC_Os05g06350 LOC_Os06g06410 LOC_Os10g35290 LOC_Os07g10350 LOC_Os11g19250 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1861n |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g03710.1 |
| Rice Genome Annotation | LOC_Os03g03710.1 |
| Ricechip | LOC_Os03g03710.1 |
| KEGG | osa:4331494 dosa:Os03t0129200-00 |
| Entrez-Gene | 4331494 |