RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g03810.1 View Network Show in Genome Browser |
| Other Names | Os03g0130300 |
| Description | DEF8 - Defensin and Defensin-like DEFL family, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1714572-1715230 Nucleotide Length: 246 |
| Protein-coding | LOC_Os03g03810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g23680 LOC_Os02g06360 |
| Downstream Genes | LOC_Os07g44180 LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 LOC_Os12g02330 LOC_Os10g22590 LOC_Os11g02389 LOC_Os10g30290 LOC_Os12g24580 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g03810.1 |
| Rice Genome Annotation | LOC_Os03g03810.1 |
| Ricechip | LOC_Os03g03810.1 |
| KEGG | osa:4331501 dosa:Os03t0130300-01 |
| Entrez-Gene | 4331501 |