RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g03900.1 View Network Show in Genome Browser |
| Other Names | Os03g0131100 |
| Description | NIN, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1776271-1780899 Nucleotide Length: 2829 |
| Protein-coding | LOC_Os03g03900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56480 LOC_Os01g04650 LOC_Os02g54510 LOC_Os01g69900 |
| Downstream Genes | LOC_Os11g25780 LOC_Os07g37040 LOC_Os09g38390 LOC_Os09g04990 LOC_Os07g25680 LOC_Os06g08280 LOC_Os12g07190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g03900.1 |
| Rice Genome Annotation | LOC_Os03g03900.1 |
| Ricechip | LOC_Os03g03900.1 |
| KEGG | osa:4331508 dosa:Os03t0131100-01 |
| Entrez-Gene | 4331508 |