RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g03920.4 View Network Show in Genome Browser |
| Other Names | Os03g0131300 |
| Description | Ubiquitin family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1791587-1796423 Nucleotide Length: 1296 |
| Protein-coding | LOC_Os03g03920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g06640 LOC_Os01g22490 LOC_Os02g57050 LOC_Os02g08300 LOC_Os01g47550 LOC_Os02g41590 LOC_Os01g09460 LOC_Os02g01010 LOC_Os01g16930 LOC_Os01g52450 LOC_Os01g53930 More.. |
| Downstream Genes | LOC_Os09g39500 LOC_Os03g13170 LOC_Os06g46770 LOC_Os05g42424 LOC_Os08g33340 LOC_Os05g06770 LOC_Os04g53620 LOC_Os11g07490 LOC_Os09g24200 LOC_Os07g09890 LOC_Os05g45590 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2866 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g03920.4 |
| Rice Genome Annotation | LOC_Os03g03920.4 |
| Ricechip | LOC_Os03g03920.4 |
| KEGG | osa:4331510 dosa:Os03t0131300-01 |
| Entrez-Gene | 4331510 |