RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g03930.1 View Network Show in Genome Browser |
| Other Names | Os03g0131400 |
| Description | tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1798696-1804326 Nucleotide Length: 1677 |
| Protein-coding | LOC_Os03g03930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12560 LOC_Os01g12570 LOC_Os01g65350 LOC_Os03g02570 |
| Downstream Genes | LOC_Os03g63490 LOC_Os05g05440 LOC_Os03g17520 LOC_Os03g19930 LOC_Os08g28230 LOC_Os05g35520 LOC_Os09g36800 LOC_Os07g31310 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g03930.1 |
| Rice Genome Annotation | LOC_Os03g03930.1 |
| Ricechip | LOC_Os03g03930.1 |
| KEGG | osa:4331511 dosa:Os03t0131400-01 |
| Entrez-Gene | 4331511 |