RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04060.1 View Network Show in Genome Browser |
| Other Names | Os03g0132900 |
| Description | CHIT16 - Chitinase family protein precursor, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1860427-1861786 Nucleotide Length: 771 |
| Protein-coding | LOC_Os03g04060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47070 |
| Downstream Genes | LOC_Os09g25060 LOC_Os03g13140 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04060.1 |
| Rice Genome Annotation | LOC_Os03g04060.1 |
| Ricechip | LOC_Os03g04060.1 |
| KEGG | osa:4331519 dosa:Os03t0132900-01 |
| Entrez-Gene | 4331519 |